Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911286.1_cds_XP_016461272.1_54607
CDS Infomation

[gene=LOC107784628] [db_xref=GeneID:107784628] [protein=uncharacterized protein LOC107784628] [protein_id=XP_016461272.1] [location=join(2917..3199,4825..4902,5022..5560,6691..7323,7482..7636,8196..8407,8529..8662,8740..9086,9161..9264,10543..10613)] [gbkey=CDS]
Sequence

ATGAATTTCCTGATGCTGAGGTCTAATCAGACTGCAGCTTCTGAGCACTCACCTGCTCGT
GAAGTTCAATCGGAGCCAAACCATGCTTCCAAACCAAGTACTACTTTAGAGGGTCTTATT
GCTGAAGATCCTTTTCCAGAGGGTGAGAAACGCGATGGTGAGGGTGATGAATATGGGAAT
GTGGATGAAGATCTTCTGGACGCAAATGAGAAGACCAACTCTCGGTTTCTTGCCAACCAC
ATTGATGTTAAAGATGAAGAAGGATGGATAACTATTCCAAAGGATAGGCTTCCTGATAAC
TGGAGTGAGGCATCAGATATATCATCCATATGCTCACTGGACCGCTTCTTTGTTATACCT
GGTGAACAGGTCCATATACTTGCATGTCTCTCAGCCTATAAGCAGGATACAGAAATTATT
ACACCTTTTAAAGTTGCGGCCGTCATGAATAAAAATGGTATTGGACAAAGCAACCAAAAA
CAAAATGGTAACACGGGGAGTAATTCGGGGTCTGTTTCCCCTGGAGGAGCAGTGGATGAT
AGTAGTGTGAGTGAGAATGGTAATGCAAAGATTGATCCCGAAAAAGAGGTTTCTGCTGGT
GAATCTCTTTTGAGATTGGAGGATTACAAAAGACAAACTGAATCACTAGTACAAAGGTTT
AACAATTCTCACTTTTTCGCTCGAATTGCCGAGTCTGATGAGCCTCTGTGGTCAAAAAGA
AAAGCTATGGAGGAAGTTTCTGATATGAATGGAGCAGATGGCTCAGAAACGGTAAAGAGA
CTTAAAAAGAAGCTTTCTTTGAGTACTTCCACTGATAAGGGAAACTTTGATGCTAGAACC
TCTGGTGGAGTGGCAAGAAATGCTGTCAAGTGTTGTGCCCTTCCAAATGGAGATATAGTG
GTACTTTTACTAGTAAATGTCGGTATTGAGTTTGTGAGAGATCCGGTGCTGGAAATTCTT
CAATTTGAGAAGTATCAGGAGAGAAGTTTGTCGTCTTTGAATGAGGAGAATTTGACTTAT
GCAAAGCAGGATCCCTGTGGTGAACTGTTGAAATGGCTACTCCCTATAGATAATTCTATT
CCCCCTTCAGCGCGACCTTTATCCCCGCCTCAGTTAAGTTCTAGTGCGAGCATTCGTAGT
ACATCCGCAAAGCCCACCTTATCTGGATCTTCTGGATCACAGCTCTTTTCTTTCGGTAAC
TTTAGAAGTTACTCCATGTCTTCACTTCCACCAAATAGTGCACCACCTCCGTCTGTTGCA
ACCTCCACTGCTGGACCAAGTTTTAATCCAGAAGATTGGGAACGTTTTTCATTTCAAAGG
TCAGTGAAAAATGATAAGACTGGGAGTGAAGGGCTTTTATCTTTTAGAGGTGTATCTCTA
GAGCCAGAAAGATTTTCTGTTCGTTGTGGTTTAGAAGGTATTTTCCTTCCTGGAAGGAGA
TGGAGGAGGAAAATTGAAATAATTCAACCAGTAGAAATTACTTCTTTTGCTGCTGACTGC
AATACAGATGATCTCCTTTGTGTCCAGATCAAGAATGTTTGTCCACCAAATGCACCTGAC
ATTGTTGTCTACATAGATGCCGTAACAATCATTTTTGAAGAAGCTTCAAAAAGCGGTCCT
CCTTTATCATTACCAATTGCATGTATTGAAGCTGGGGATGACTATAGTTTGCCAAATTTG
GCCCTCAGGAGAGGTGAAGAACACTCTTTCATTCTCAAACCAGTCAATCCCATCTTGAAG
AGTTCCAACGGCCATACTGGAAAAGCTTTTCGATCTTCACGGGTACATTCTAGAACCGCA
GCATCAACGTGGCACCATTTCTCCAATGTTGAGGAAAGAAATATTGGGTCACCTACTGAT
CAATATGCAGTTCTGGTATCATGTCGATGCAACTACACAGAATCAAAGTTATTCTTCAAG
CAGCCAACAAGCTGGAGACCACGAATTTCTAGGGACCTTATGATCTCTGTTGCATCTGAA
ATGACAAAACAAACCCTTGGATCTTTTGAAGGAGGTGCTCAGCTTCCAGTACAGGTCTTA
ACTCTTCAGGCATCAAACCTGACTTCACAAGATCTAACAATGACAGTGCTTGCTCCAGCT
TCCCTTACTTCCCCACCTTCTGTGGTGTCATTGAGCACTTCACCAACATCACCAATGAGT
CCCTTCATTGGTTCTTCTGATTTCACAGAGAGAGTGAGTATCGATAAGCAAATAACTGCT
GCTCAGAGCAATAGCTTGGTATCAGTTAATCAAGTACCGGAAGGAAAAAGTCTTTCTCAA
TCAGTTTCATTTAGTGAGAGGGCCACTCCCATACCTGATGTGCTTCCAAATGGCAATTTA
GGTTGTACACATTTATGGTTGCAGAGCAGAGTTCCCTTAGGATGTGTGCCCTCTCAATCT
ACAGCAACCATCAAACTTGAACTACTCCCCCTAACGGATGGTATAATCACACTTGATTCT
TTACAGATTGATGTTAAGGAGAAAGGTGTGACGTATATTCCCGAGCATTCGTTGAAGATT
AATGCAACTTCAAGCATTTCCACGGGGATTATATGA

Peptide Sequence

PEP ID

XP_016461272.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107784628 [Nicotiana tabacum]
Sequence

MNFLMLRSNQTAASEHSPAREVQSEPNHASKPSTTLEGLIAEDPFPEGEKRDGEGDEYGN
VDEDLLDANEKTNSRFLANHIDVKDEEGWITIPKDRLPDNWSEASDISSICSLDRFFVIP
GEQVHILACLSAYKQDTEIITPFKVAAVMNKNGIGQSNQKQNGNTGSNSGSVSPGGAVDD
SSVSENGNAKIDPEKEVSAGESLLRLEDYKRQTESLVQRFNNSHFFARIAESDEPLWSKR
KAMEEVSDMNGADGSETVKRLKKKLSLSTSTDKGNFDARTSGGVARNAVKCCALPNGDIV
VLLLVNVGIEFVRDPVLEILQFEKYQERSLSSLNEENLTYAKQDPCGELLKWLLPIDNSI
PPSARPLSPPQLSSSASIRSTSAKPTLSGSSGSQLFSFGNFRSYSMSSLPPNSAPPPSVA
TSTAGPSFNPEDWERFSFQRSVKNDKTGSEGLLSFRGVSLEPERFSVRCGLEGIFLPGRR
WRRKIEIIQPVEITSFAADCNTDDLLCVQIKNVCPPNAPDIVVYIDAVTIIFEEASKSGP
PLSLPIACIEAGDDYSLPNLALRRGEEHSFILKPVNPILKSSNGHTGKAFRSSRVHSRTA
ASTWHHFSNVEERNIGSPTDQYAVLVSCRCNYTESKLFFKQPTSWRPRISRDLMISVASE
MTKQTLGSFEGGAQLPVQVLTLQASNLTSQDLTMTVLAPASLTSPPSVVSLSTSPTSPMS
PFIGSSDFTERVSIDKQITAAQSNSLVSVNQVPEGKSLSQSVSFSERATPIPDVLPNGNL
GCTHLWLQSRVPLGCVPSQSTATIKLELLPLTDGIITLDSLQIDVKEKGVTYIPEHSLKI
NATSSISTGII

Transcript Sequence

Gene sequence data has not been registered.